Dihexa
Molecular Profile
Compound
Dihexa
Also known as
PNB-0408
Formal name
N-hexanoic-Tyr-Ile-(6)-aminohexanoic acid amide
CAS number
1401708-83-5
Molecular formula
C27H44N4O5
Molecular weight
504.67 g/mol
Amino acid sequence
Tyr-Ile, within a capped peptidomimetic, see below
Purity
greater than 99 percent
Physical form
Lyophilized powder
Synthesis route
Solid-phase peptide synthesis
What Dihexa is, structurally
Dihexa is a peptidomimetic rather than a peptide. Only two of its four units are ordinary amino acids, and both ends are chemically capped, which changes its behaviour fundamentally.
From the formal name: a hexanoyl group, a six-carbon fatty acyl chain, sits on the nitrogen of a tyrosine, which joins isoleucine in the usual way. Isoleucine then joins 6-aminohexanoic acid, not a proteinogenic residue but a straight six-carbon chain with an amine at one end and a carboxyl at the other, terminating as an amide rather than a free acid.
The formula accounts for this exactly. Four nitrogens are the four amide linkages and nothing else, since neither tyrosine nor isoleucine carries a side-chain nitrogen. The five oxygens are the four carbonyls plus the tyrosine phenol.
The consequence separates this compound from every peptide alongside it. The N-terminus is acylated, so no free amine. The C-terminus is an amide, so no free acid. Neither side chain ionises in an ordinary working range, isoleucine being aliphatic and the tyrosine phenol having a pKa around ten. The molecule carries no charge at all under normal conditions, where a peptide of this size would carry several.
That neutrality, with two six-carbon chains and an aromatic ring, makes this markedly lipophilic for its mass. It should not be assumed to dissolve freely in water as the charged peptides here do.
Reconstitution and handling
This is the one compound in this set where sterile water may not be the right first choice. A neutral, lipophilic molecule can dissolve slowly or incompletely in water. Where that proves limiting, the conventional approach for a small molecule of this character is a concentrated stock in an organic co-solvent such as DMSO, then dilution into aqueous buffer. Confirm compatibility with the downstream use first.
Whatever the solvent, add it down the vial wall, swirl gently, and let it stand until genuinely clear. Do not vortex. With no charge to keep it dispersed, incomplete dissolution is easy to mistake for a clear solution.
Adsorption is a real concern here rather than a formality. Uncharged lipophilic molecules bind polypropylene more readily than charged hydrophilic peptides, so low-protein-binding tubes and minimal transfers both matter at low concentration.
This is laboratory preparation chemistry, not dosing, administration, or protocol guidance of any kind.
Storage and stability
Store the lyophilized solid at -20 degrees C, sealed, desiccated and protected from light, and let a cold vial warm before opening.
The degradation profile is narrow. No sulfur anywhere in the formula removes oxidation at sulfur entirely. No asparagine or glutamine means no deamidation, no aspartate means no isomerisation, and the capped termini remove the free ends an ordinary peptide presents.
What remains is amide hydrolysis under strong acid or alkali, slow near neutral pH, and oxidation of the tyrosine phenol, the only oxidisable group present and far less labile than methionine or tryptophan. Cold, dark, near-neutral storage covers both. Keep any DMSO stock dry, since DMSO is hygroscopic and a stock drawing water changes concentration.
These are storage conditions for the material, not dosing or administration guidance.
How Dihexa is tested
Reversed-phase HPLC establishes chromatographic purity as area percent. The tyrosine gives usable absorbance near 280 nm as well as the low-UV amide signal at 214 nm.
Retention is the opposite of the short polar peptides here. A neutral lipophilic molecule is strongly retained on C18 and elutes late, often needing a higher organic proportion than a peptide method uses. A gradient tuned for hydrophilic peptides may not elute it within the run.
Area percent remains a chromatographic measure, not compound content by weight. With both termini capped and no basic side chain, there is no site for a trifluoroacetate counter-ion, so the salt burden that complicates peptide mass accounting is largely absent. That is a real difference from the rest of the catalogue, not an omission.
Mass spectrometry confirms identity against the expected weight. The impurity classes to watch are deletion products of a short synthesis and material where the terminal amide has hydrolysed to the free acid, one mass unit heavier and readily separated.
These describe general methodology, not a claim about any particular batch.
Handling FAQ
Why might water not dissolve this properly? Because the molecule carries no charge. Both termini are capped and neither side chain ionises in the working range, so nothing drives solvation the way it does for a peptide bearing several charges. Two six-carbon chains and an aromatic ring make it lipophilic besides.
Is there a counter-ion to account for, as with other peptides? Largely not. Trifluoroacetate associates with basic sites, and this molecule has none: no free N-terminal amine and no basic side chain. The mass in the vial is therefore closer to being all compound than it is for a typical synthetic peptide salt.
Full specifications for Dihexa.
Dihexa is available as a research compound, HPLC-verified with a batch-specific COA.
For mechanism and published findings, see the research article.
Related Compounds



