Chemistry & Lab Handling

N-Acetyl Epitalon Reference

Molecular Profile

Compound

N-Acetyl Epitalon

CAS number

N/A (modified Epitalon form)

Molecular formula

C16H25N5O9

Molecular weight

431.40 g/mol

Amino acid sequence

Ac-Ala-Glu-Asp-Gly-NH2

Purity

greater than 99 percent

Physical form

Lyophilized powder

What N-Acetyl Epitalon is, structurally

This is a tetrapeptide whose N-terminus carries an acetyl group in place of a free amine, and whose C-terminus is an amide in place of a free acid.

The formula reconciles exactly. Five nitrogens means four backbone amides plus the C-terminal amide, and no side-chain nitrogen, the acetyl contributing none. The nine oxygens divide as one acetyl carbonyl, four backbone carbonyls, the last of them in the terminal amide, and four across the acidic side chains.

Two caps distinguish this from the unmodified tetrapeptide, the acetyl at the N-terminus and the amide at the C-terminus, and their effects are precisely bounded. Capping the N-terminus removes the free amine, which does three things: it removes a positive charge; it removes the substrate an aminopeptidase works from; and it closes off diketopiperazine formation, which needs a free amine. Amidating the C-terminus removes the terminal carboxylate, a negative charge, so the two caps leave the net charge where it was on the unmodified tetrapeptide.

What the two caps do not do is worth stating as plainly, since it is easy to assume a modification protects generally. The weak point sits inside the chain, untouched by either. That is covered under stability.

Charge is otherwise negative: two side-chain carboxylates with nothing opposing them, both ends being capped. The peptide is highly polar and water soluble, though no quantitative figure is quoted here. There is no cysteine, no methionine and no aromatic residue.

Structure at a glance

N-Acetyl Epitalon as stored in the product database: 4 residues, one box each. The sequence agrees with the stored molecular formula.

Ac: N-terminal acetyl group. NH2: C-terminal amide. Letters are one-letter amino acid codes.

Drawn from the product database.

Reconstitution and handling

Sterile water is the default solvent, and with no metal centre present PBS or an appropriate assay buffer are equally suitable. Add diluent down the vial wall, swirl gently, and let it stand until clear. Vortexing only introduces foaming.

Prepare near neutral and use solutions promptly. The rearrangement described below is fastest in neutral to mildly alkaline solution, exactly where a working buffer sits.

Adsorption onto plasticware is worth allowing for at low concentration, and low-protein-binding tubes reduce measured loss. A small, anionic peptide has limited affinity for polypropylene.

This is laboratory preparation chemistry, not dosing, administration, or protocol guidance of any kind.

Storage and stability

Store the lyophilized powder at -20 degrees C, sealed, desiccated and protected from light, and let a cold vial warm before opening. Reconstituted, hold at 2 to 8 degrees C, or aliquot and freeze rather than thawing repeatedly.

There is no cysteine to oxidise, no methionine to form a sulfoxide, and no asparagine or glutamine to deamidate. Oxidation plays no part in this molecule's degradation at all.

The one real liability is the aspartate at position three, followed by glycine. Aspartate rearranges to isoaspartate through a succinimide ring, formed when the backbone nitrogen of the following residue attacks its side chain, and glycine accelerates that more than any other residue, having no side chain to obstruct the closure. This is the fastest version of the commonest aspartyl liability.

Neither cap offers protection here. The caps guard the ends of the chain; this reaction happens at the aspartate, inside it. A modification that blocks aminopeptidase attack and diketopiperazine formation leaves the dominant chemical route untouched. Cold, dry, near-neutral storage limits it, since the reaction needs water.

These are storage conditions for the material, not dosing or administration guidance.

How N-Acetyl Epitalon is tested

Reversed-phase HPLC establishes chromatographic purity as area percent. With no aromatic residue there is no 280 nm absorbance, so detection sits near 214 nm where the amide bond absorbs.

Retention differs slightly from the uncapped peptide. Capping both ends removes both terminal charges, and the acetyl adds a small non-polar contribution, so it retains marginally better on C18. Both still elute early.

Area percent is a chromatographic measure rather than peptide content by weight. Solid-phase synthesis delivers a salt, though with the N-terminus capped and no basic side chain, this molecule has no site for a trifluoroacetate counter-ion to associate with, so the salt burden is lower here than on most synthetic peptides.

Mass spectrometry confirms identity against the expected weight, and one impurity class is specific to an acetylated peptide: incompletely capped material, where acetylation failed, is 42 mass units lighter and considerably more polar, so it separates readily. Isoaspartate remains invisible to mass, being isobaric with aspartate, and only chromatography will show it.

These describe general methodology, not a claim about any particular batch.

Handling FAQ

Does the acetyl group make this more stable?+

At the N-terminus, yes. It blocks aminopeptidase attack and prevents diketopiperazine formation, both of which need a free amine. It does nothing for the aspartate-glycine pair at the far end of the molecule, which is the actual dominant liability.

What does a species 42 mass units lighter indicate?+

Peptide lacking the acetyl cap, where the acetylation step did not go to completion. An acetyl group weighs 42, so its absence is a clean mass difference and that form is also more polar, making it straightforward to resolve chromatographically. Full specifications for N-Acetyl Epitalon.

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