Chemistry & Lab Handling

Melanotan-2 Reference

Reviewed by Dr. Martina Rossi, PhD

Scientific Contributor and Reviewer · Reviewed

Molecular Profile

Compound

Melanotan-2

CAS number

121062-08-6

Molecular formula

C50H69N15O9

Molecular weight

1024.18 g/mol

Amino acid sequence

Ac-Nle-cyclo[Asp-His-D-Phe-Arg-Trp-Lys]-NH2

Purity

greater than 99 percent

Physical form

Lyophilized powder

What Melanotan-2 is, structurally

Melanotan-2 is a cyclic peptide. Its sequence, given in the profile above, is Ac-Nle-cyclo[Asp-His-D-Phe-Arg-Trp-Lys]-NH2, and the observations here draw on that sequence and the molecular formula.

The formula's most useful statement concerns the ring, and it corrects an assumption people commonly bring to cyclic peptides. C50H69N15O9 contains no sulfur at all. A disulfide bridge requires two cysteines and therefore two sulfur atoms, so whatever closes this ring, it is not a disulfide. It cannot be.

That changes the handling advice completely. The precautions that matter for a disulfide-cyclized peptide, keeping dithiothreitol or TCEP out of the buffer, avoiding thiol excess, watching for scrambling at alkaline pH, are all irrelevant here. A ring closed by an amide bond, which the published structure describes, is chemically ordinary and far more robust. It does not open on reduction and it does not scramble.

Fifteen nitrogens on a molecule of this mass is a high proportion, indicating nitrogen-rich side chains rather than a simple backbone, consistent with the arginine, histidine and tryptophan the published structure lists. Both termini are blocked in that structure, acetylated and amidated, removing the free amine and free acid an ordinary peptide carries.

The effect is a strongly constrained molecule: a ring, two capped termini, no free chain end. It is water soluble, though no quantitative figure is quoted here.

Structure at a glance

Melanotan II as stored in the product database: 7 residues, one box each. The sequence agrees with the stored molecular formula.

Ac: N-terminal acetyl group. NH2: C-terminal amide. A raised D marks a D-amino acid. Nle: norleucine. Bracket above: residues joined in a ring. Codes are three-letter amino acid codes.

Drawn from the product database.

Reconstitution and handling

Sterile water is the default solvent, and with no metal center present PBS or an appropriate assay buffer are equally reasonable. Add diluent down the inside wall of the vial, swirl gently, and let the solution clarify.

Reducing agents are not a concern for the ring, unlike a disulfide-cyclized peptide, since there is nothing for them to open. There is no reason to add one either, the molecule containing no sulfur at all.

Work in subdued light and do not leave solutions standing under illumination. The published structure includes a tryptophan, the most photosensitive residue in the standard set.

Adsorption onto plasticware is worth allowing for at low concentration, with low-protein-binding tubes reducing measured loss. Its arginine side chain is strongly basic, so interaction with negatively charged surfaces is chemically plausible.

This is laboratory preparation chemistry, not dosing, administration, or protocol guidance of any kind.

Storage and stability

Store the lyophilized powder at -20 degrees C, sealed, desiccated and protected from light, and let a cold vial warm before opening. Reconstituted, hold at 2 to 8 degrees C, or aliquot and freeze rather than thawing repeatedly.

The stability picture is dominated by one residue and helped by the architecture. No sulfur means no thiol oxidation, no sulfoxide and no disulfide to scramble. The blocked termini remove the chain ends an exopeptidase would work from, and an amide-closed ring adds no liability of its own, amides hydrolyzing only far from neutral.

What remains is oxidation of the tryptophan the published structure places in the ring, driven by air, light and trace metals. The histidine also present coordinates metals, which makes the third worth more attention than usual, since bound metal near an oxidizable indole promotes exactly that reaction.

These are storage conditions for the material, not dosing or administration guidance.

How Melanotan-2 is tested

Reversed-phase HPLC establishes chromatographic purity as area percent. The indole indicated by the published structure gives usable absorbance near 280 nm alongside the low-UV amide measurement at 214 nm.

Area percent is a chromatographic measure rather than peptide content by weight. Solid-phase synthesis delivers a salt, commonly trifluoroacetate or acetate, associating with the basic arginine side chain.

Two impurity classes are specific to a cyclic peptide, and neither arises on a linear one. The first is uncyclised linear precursor. Ring closure eliminates a water molecule, so the linear form is eighteen mass units heavier and is resolved straightforwardly by mass. The second is the cyclic dimer, two chains joined head to tail rather than each closing on itself, at roughly twice the parent mass. Neither shows in a purity percentage.

Mass spectrometry confirms identity against the expected weight and reads tryptophan oxidation directly, at sixteen and thirty-two mass units above the molecular ion.

These describe general methodology, not a claim about any particular batch.

Handling FAQ

Is the ring a disulfide, and do reducing agents need to be kept out?+

No, and no. The molecular formula contains no sulfur at all, so a disulfide is impossible regardless of anything else. The ring is closed by an amide bond, which reducing agents do not open. This is the opposite of the situation on a disulfide-cyclized peptide.

What does a species eighteen mass units heavier than expected indicate?+

Most likely uncyclised linear precursor. Closing the ring releases one water molecule, so material where closure failed retains that water and weighs eighteen more. It is a synthesis-related impurity rather than a degradation product. Full specifications for Melanotan-2.

Dr. Martina Rossi, PhD

Reviewed for scientific accuracy

Dr. Martina Rossi, PhD

PhD, Université Grenoble Alpes · Scientific Contributor and Reviewer

Dr. Rossi's doctoral research at Université Grenoble Alpes examined the vascular functions of bone morphogenetic proteins. Her peer-reviewed work spans cell and molecular biology, vascular biology, and gene therapy, in journals including Cardiovascular Research, Scientific Reports, and Brain Sciences. She reviews Pure Peptides' product, reference, and research pages for scientific accuracy against the sources they cite.

Reviewed ORCIDGoogle ScholarTeam profile →

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